Emerging Mathematical Frontiers in Molecular Evolution

August 1 - August 5, 2022

One of the main tasks in phylogenomics is the reconstruction of detailed evolutionary scenarios of taxa (e.g. species) and underlying entities (e.g. genes, genomic markers or parasites) that evolve alongside these taxa. While the history of such taxa can be described independently from the history of the underlying entities, only a detailed scenario (i.e., a reconciliation between these histories) can provide a full picture of evolution. In particular, such full scenarios provide a framework to understand the evolutionary dependencies of the underlying taxa and the considered entities in more detail; a task that is crucial for a deeper understanding of the behavior of tumors, the evolution of viruses, the understanding of drug resistance in bacteria forced by horizontal gene transfer and many more.

Many methods that deal with the latter type of problem have been investigated in the past. Although numerous deep results have been established over the years, much remains to be done due to the increasing amount of data and the exciting challenges they pose for mathematical phylogenomics. To make the next step in addressing these challenges and to be able to design powerful mathematical approaches and algorithms we need new ways to combine approaches and techniques from seemingly unrelated areas including combinatorics, algebra or statistics.

The aim of this conference is to bring together both renowned experts and promising young scientists working in mathematical phylogenomics. We envisage this event as an opportunity to explore new links between different mathematical fields for phylogenomics. This will help assessing what these fields can bring to each other, a prelude to the development of hybrid methods aimed at tackling current and future problems raised by the study of genomics and evolution.

Seminars Scroll to the next upcoming seminar

  • Phylogenetic trees August 01 10:00 - 11:30

    Phylogenetic trees

  • Discussions August 01 11:30 - 12:00

    Discussions

  • Phylogenetic networks August 01 13:30 - 15:30

    Phylogenetic networks

  • Breakout session August 01 15:30 - 17:00

    Breakout session

  • Algebraic Approaches August 02 09:30 - 11:30

    Algebraic Approaches

  • Discussions August 02 11:30 - 12:00

    Discussions

  • Phylogenetic networks August 02 13:30 - 15:30

    Phylogenetic networks

  • Breakout session August 02 15:30 - 17:00

    Breakout session

  • Phylogenetic trees August 03 09:30 - 11:30

    Phylogenetic trees

  • Discussions August 03 11:30 - 12:00

    Discussions

  • Probabilistic models August 03 13:30 - 15:30

    Probabilistic models

  • Breakout session August 03 15:30 - 17:00

    Breakout session

  • Phylogenetic reconciliation August 04 09:30 - 11:00

    Phylogenetic reconciliation

  • Breakout session August 04 11:00 - 12:00

    Breakout session

  • Synthesis session, Impulse talks August 04 13:30 - 15:30

    Synthesis session, Impulse talks

  • Breakout session August 04 15:30 - 17:00

    Breakout session

  • Summary session (by the organizers) August 05 09:30 - 10:00

    Summary session (by the organizers)

  • Breakout session August 05 10:00 - 11:30

    Breakout session

Participants

Name University Country Arrival and Departure
Elizabeth
Allman
University: University of Alaska Fairbanks City: United States Arrival and Departure: -
Lars
Arvestadt (Online)
University: Stockholm University City: Sweden Arrival and Departure: -
Tom
Britton
University: Stockholm University City: Sweden Arrival and Departure: -
David
Bryant (Online)
University: University of Otago City: New Zealand Arrival and Departure: -
Marta
Casanellas (Online)
University: Universitat Politecnica de Catalunya City: Spain Arrival and Departure: -
Janosch
Döcker
University: Universität Tübingen City: Germany Arrival and Departure: -
Nadia
El-Mabrouk
University: University of Montréal City: Canada Arrival and Departure: -
Oliver
Eulenstein (Online)
University: Iowa State University City: United States Arrival and Departure: -
Mareike
Fischer
University: University of Greifswald City: Germany Arrival and Departure: -
Andrew
Francis
University: Western Sydney University City: Australia Arrival and Departure: -
Philippe
Gambette
University: Université Gustave Eiffel City: France Arrival and Departure: -
Pawel Piotr
Gorecki (Online)
University: University of Warsaw City: Poland Arrival and Departure: -
Dan
Gusfield
University: University of california, Davis City: United States Arrival and Departure: -
Marc
Hellmuth
University: Stockholm University City: Sweden Arrival and Departure: -
Michael
Hendriksen
University: University of Melbourne City: Australia Arrival and Departure: -
Barbara
Holland (Online)
University: University of Tasmania City: Australia Arrival and Departure: -
Katharina
Huber
University: University of East Anglia City: United Kingdom Arrival and Departure: -
Daniel
Huson
University: University of Tübingen City: Germany Arrival and Departure: -
Remie
Janssen (Online)
University: Nelen en Schuurmans City: The Netherlands Arrival and Departure: -
Mark
Jones
University: TU Delft City: The Netherlands Arrival and Departure: -
Michael
Joswig
University: Berlin Institute of Technology City: Germany Arrival and Departure: -
Steven
Kelk
University: Maastricht University City: The Netherlands Arrival and Departure: -
Laura
Kubatko (Online)
University: The Ohio State University City: United States Arrival and Departure: -
Manuel
Lafond
University: Université de Sherbrooke City: Canada Arrival and Departure: -
Jens
Lagergren
University: KTH Royal Institute of Technology City: Sweden Arrival and Departure: -
Chun-Biu
Li
University: Stockholm University City: Sweden Arrival and Departure: -
Svante
Linusson
University: KTH Royal Institute of Technology City: Sweden Arrival and Departure: -
Simone
Linz
University: University of Auckland City: New Zealand Arrival and Departure: -
Alitzel
López Sánchez
University: Université Sherbrooke City: Canada Arrival and Departure: -
Liam
Maher
University: University of East Anglia City: United Kingdom Arrival and Departure: -
Kerry
Manson (Online)
University: University of Canterbury City: New Zealand Arrival and Departure: -
Samuel
Martin
University: Earlham Institute City: United Kingdom Arrival and Departure: -
Vincent
Moulton
University: University of East Anglia City: United Kingdom Arrival and Departure: -
Yukihiro
Murakami (Online)
University: TU Delft City: The Netherlands Arrival and Departure: -
Megan
Owen
University: City University of New York City: United States Arrival and Departure: -
Fabio
Pardi
University: CNRS, Université de Montpellier City: France Arrival and Departure: -
Joan Carles
Pons Mayol
University: University of the Balearic Islands City: Spain Arrival and Departure: -
John
Rhodes (Online)
University: Universuty of Alaska Fairbanks City: United States Arrival and Departure: -
Fredrik
Ronquist
University: Swedish Museum of Natural History / Stockholm University City: Sweden Arrival and Departure: -
Kristoffer
Sahlin
University: Stockholm University City: Sweden Arrival and Departure: -
David
Sankoff
University: University of Ottawa City: Canada Arrival and Departure: -
Guillaume
Scholz
University: Leipzig University City: Germany Arrival and Departure: -
Benjamin
Schröter
University: KTH Royal Institute of Technology City: Sweden Arrival and Departure: -
Céline
Scornavacca (Online)
University: CNRS City: France Arrival and Departure: -
Charles
Semple
University: University of Canterbury City: New Zealand Arrival and Departure: -
Blerina
Sinaimeri (Online)
University: LUISS University City: Italy Arrival and Departure: -
Andreas
Spillner
University: Merseburg University of Applied Sciences City: Germany Arrival and Departure: -
Katherine
St. John
University: City University New York City: United States Arrival and Departure: -
Peter F.
Stadler
University: Leipzig University City: Germany Arrival and Departure: -
Mike
Steel (Online)
University: University of Canterbury City: New Zealand Arrival and Departure: -
Joshua
Stevenson (Online)
University: University of Tasmania City: Australia Arrival and Departure: -
Jeremy
Sumner
University: University of Tasmania City: Australia Arrival and Departure: -
Angelica
Torres
University: KTH Royal Institute of Technology City: Sweden Arrival and Departure: -
Paul
Tupper (Online)
University: Simon Fraser University City: Canada Arrival and Departure: -
Leo
van Iersel
University: TU Delft City: The Netherlands Arrival and Departure: -
Kristina
Wicke
University: The Ohio State University City: United States Arrival and Departure: -
Nicolas
Wieseke
University: Leipzig University City: Germany Arrival and Departure: -
Yufeng
Wu
University: University of Connecticut City: United States Arrival and Departure: -
Taoyang
Wu (Online)
University: University of East Anglia City: United Kingdom Arrival and Departure: -
Louxin
Zhang
University: National University of Singapore City: Singapore Arrival and Departure: -
Anna
Zhukova
University: Institut Pasteur City: France Arrival and Departure: -